entry SIGSCAN
number 10099
history gk 07/10/90 innitial entry
status questionnaire
res.nam Dan Prestridge
res.add Molecular Biology Computing Center (MBCC)
University of Minnesota
1479 Gortner Ave.
St. Paul, MN 55108
U.S.A.
res.tel (612) 625-3744
res.fax -
res.net DANP@MOLBIO.UMN.EDU
gen.nam Dan Prestridge
gen.add Molecular Biology Computing Center (MBCC)
University of Minnesota
1479 Gortner Ave.
St. Paul, MN 55108
U.S.A.
gen.tel (612) 625-3744
gen.fax -
gen.net DANP@MOLBIO.UMN.EDU
con.nam Dan Prestridge
con.add Molecular Biology Computing Center (MBCC)
University of Minnesota
1479 Gortner Ave.
St. Paul, MN 55108
U.S.A.
con.tel (612) 625-3744
con.fax -
con.net DANP@MOLBIO.UMN.EDU
acc.nam Dan Prestridge
acc.add Molecular Biology Computing Center (MBCC)
University of Minnesota
1479 Gortner Ave.
St. Paul, MN 55108
U.S.A.
acc.tel (612) 625-3744
acc.fax -
acc.net DANP@MOLBIO.UMN.EDU
name.now Signal Scan
nam.alt Transcriptional Factor Database
nam.obs -
source literature
funding NIH; Duke University
citation -
charter Signal Scan is a program which has been developed to aid the
molecular biologist in determining what eukaryotic transcription
factor elements, and other significant elements, may exist in a
DNA sequence. To accomplish this a database of these elements
has been innitiated. This program, at present, is most useful
for analyzing mammalian sequences due to the prevalence of
mammalian elements in the database. A list of elements may also
be entered by the user. Signal Scan uses both elements derived
from biochemical characterization and elements from derived
consensus sequences to match against a user input DNA sequence.
While any sequence element matching an element in the database
will be reported by the program, the determination of the
biological relevance of the element is left up to the
investigator.
crossref -
data.pri nucleotide sequences [transcriptional element]
data.sec literature citation [transcriptional element]; proteins
[transcription factor, names]
hardware IBM PC/AT or compatible; Sun 4
op.sys MS DOS; UNIX
dbms -
language -
software -
format -
access no limitations
updates 1 per year
con.onl no
con.mag no
con.flp no
con.elm yes
con.pap yes
acc.onl no
acc.mag no
acc.flp yes
acc.elm yes
acc.pap no
byt.all 0.01 Mb
byt.pri 0.01 Mb
ent.pri 178
comment -
Return to Index